| Gene Model: Asip |
| Sequence of Experimental Sample |
| Nomenclature | Genomic Location |
| Symbol | Asip | Chromosome | 1 |
| Name | Agouti Signaling Protein | Linkage map | 20 cM |
| Species | Dracomimus familiaris | Genome Coordinates | 1: 20 Mbp |
....................................................ATGACAGT
9 GGGATTTTTTCTCCCAACAATGAAAAGGAAGAACCTTTTCCTAAGCCTATTGCTCTGCTA
69 CAGTTTGCTCAGAGCTGCCAGTTCTCACCTCATAATCGAGGAGAAGACAGAATGCAACCT
129 TTCAAAGAGCAACAAAATGAACCTCCCAGATCTCCCACCCATCTCCATTGTAGATTTAAC
189 TAAAAGATCCCAGAAAGTCAGCAGAAAAGAGGCAGAGAATAAGAAATCTTCCAAGAAAAA
249 TGCTGAACTGAAGGCACCTCCAAAACCAAGGCCCACACCTGCTGCTGACTGCGTGCCAAA
309 CTTCAAAACCTGCAAACCACACTTGAATTCATGTTGTAACTACTGTGCGTTGTGCAAATG
369 CCGAATTTTTCAGACTATCTGCCAATGTCTACTGTTAAACCCAAAGTGTTAA........
| Predicted Transcript Alignment |
Query is the experimental sequence.
Subject is the genomic sequence and gene model from the whole genome sequence assembly of Nightwing.
Query: 1 ....................................................ATGACAGT
....................................................ATGACAGT
Subject: 1 ....................................................ATGACAGT
Query: 9 GGGATTTTTTCTCCCAACAATGAAAAGGAAGAACCTTTTCCTAAGCCTATTGCTCTGCTA
GGGATTTTTTCTCCCAACAATGAAAAGGAAGAACCTTTTCCTAAGCCTATTGCTCTGCTA
Subject: 9 GGGATTTTTTCTCCCAACAATGAAAAGGAAGAACCTTTTCCTAAGCCTATTGCTCTGCTA
Query: 69 CAGTTTGCTCAGAGCTGCCAGTTCTCACCTCATAATCGAGGAGAAGACAGAATGCAACCT
CAGTTTGCTCAGAGCTGCCAGTTCTCACCTCATAATCGAGGAGAAGACAGAATGCAACCT
Subject: 69 CAGTTTGCTCAGAGCTGCCAGTTCTCACCTCATAATCGAGGAGAAGACAGAATGCAACCT
Query: 129 TTCAAAGAGCAACAAAATGAACCTCCCAGATCTCCCACCCATCTCCATTGTAGATTTAAC
TTCAAAGAGCAACAAAATGAACCTCCCAGATCTCCCACCCATCTCCATTGTAGATTTAAC
Subject: 129 TTCAAAGAGCAACAAAATGAACCTCCCAGATCTCCCACCCATCTCCATTGTAGATTTAAC
Query: 189 TAAAAGATCCCAGAAAGTCAGCAGAAAAGAGGCAGAGAATAAGAAATCTTCCAAGAAAAA
TAAAAGATCCCAGAAAGTCAGCAGAAAAGAGGCAGAGAATAAGAAATCTTCCAAGAAAAA
Subject: 189 TAAAAGATCCCAGAAAGTCAGCAGAAAAGAGGCAGAGAATAAGAAATCTTCCAAGAAAAA
Query: 249 TGCTGAACTGAAGGCACCTCCAAAACCAAGGCCCACACCTGCTGCTGACTGCGTGCCAAA
TGCTGAACTGAAGGCACCTCCAAAACCAAGGCCCACACCTGCTGCTGACTGCGTGCCAAA
Subject: 249 TGCTGAACTGAAGGCACCTCCAAAACCAAGGCCCACACCTGCTGCTGACTGCGTGCCAAA
Query: 309 CTTCAAAACCTGCAAACCACACTTGAATTCATGTTGTAACTACTGTGCGTTGTGCAAATG
CTTCAAAACCTGCAAACCACACTTGAAT*CATGTTGTAACTACTGTGCGTTGTGCAAATG
Subject: 309 CTTCAAAACCTGCAAACCACACTTGAATCCATGTTGTAACTACTGTGCGTTGTGCAAATG
Query: 369 CCGAATTTTTCAGACTATCTGCCAATGTCTACTGTTAAACCCAAAGTGTTAA........
CCGAATTTTTCAGACTATCTGCCAATGTCTACTGTTAAACCCAAAGTGTTAA........
Subject: 369 CCGAATTTTTCAGACTATCTGCCAATGTCTACTGTTAAACCCAAAGTGTTAA........
| Predicted Protein Alignment |
Query is the experimental sequence.
Subject is the genomic sequence and gene model from the whole genome sequence assembly of Nightwing.
Query: 1 MTVGFFLPTMKRKNLFLSLLLCYSLLRAASSHLIIEEKTECNLSKSNKMNLPDLPPISIV
MTVGFFLPTMKRKNLFLSLLLCYSLLRAASSHLIIEEKTECNLSKSNKMNLPDLPPISIV
Subject: 1 MTVGFFLPTMKRKNLFLSLLLCYSLLRAASSHLIIEEKTECNLSKSNKMNLPDLPPISIV
Query: 61 DLTKRSQKVSRKEAENKKSSKKNAELKAPPKPRPTPAADCVPNFKTCKPHLNSCCNYCAL
DLTKRSQKVSRKEAENKKSSKKNAELKAPPKPRPTPAADCVPNFKTCKPHLN*CCNYCAL
Subject: 61 DLTKRSQKVSRKEAENKKSSKKNAELKAPPKPRPTPAADCVPNFKTCKPHLNPCCNYCAL
Query: 121 CKCRIFQTICQCLLLNPKC-
CKCRIFQTICQCLLLNPKC-
Subject: 121 CKCRIFQTICQCLLLNPKC-
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