| Gene Model: Otc |
| Sequence of Experimental Sample |
| Nomenclature | Genomic Location |
| Symbol | Otc | Chromosome | X |
| Name | Ornithine carbamoyltransferase | Linkage map | unknown |
| Species | Dracomimus familiaris | Genome Coordinates | X: 20 Mbp |
1 ATGCTGTTGAATTTTAGGTCTCTGTTCAATGCGGGACATGCCAACAGGATCCGCAAACAT
61 CTGGTGCAATGTCTTTGTTCCAGGCATGGGCAACCTACAGAATCTCCCATTCAGCTGAAA
121 GGCCATGACCTTCTAACGTTACAAAATTATAAAGCAGAGGAAATCGAATATTTGCTTTGG
181 GCAGCATCGGATTTAAAAGAGAGAATCAAACACAAGAAGGAGCATTTGCCTTTGCTGCAA
241 GGAAAATCCTTAGCAATGATTTTTGAAAAAAGAAGCACAAGGACTAGAATATCTACAGAG
301 ACAGGATTTGCTCTCCTTGGAGGTCATCCCTGTTTCCTCACACTGCAAGACATTCACCTG
361 GGCATTAATGAGAGCATCATGGACACAGCACTAGTATTGTCAACCATGACAGATGCAATC
421 CTAGCACGAGTCTATAAACAGGGTGATCTAGAGATGTTGGCACAAGAGGCCACAATCCCC
481 GTGATAAATGGACTGTCAGATTTTGACCATCCTATCCAGATTTTGGCTGATTACCTTACA
541 CTTCAGGAACACTACGGATCTTTGAAAGGTTTGACACTCAGCTGGATAGGTGATGGAAAT
601 AATGTTCTGAATTCTATTATGCTGAGTGCTGCTAAATTTGGGATGGATCTGCACATTGCT
661 ACTCCAAAAGGCTTTGAGCCAGATCCCATGGTGATTCAAATAGCAGAAGATTATTCCAGA
721 AAGTACTGCACCAAACTGTTTCTCACCACTAATCCTCTTGAAGCTGCCAATGGAGCTAAT
781 GTTTTGATCACAGACACATGGATAAGCATGGGGCAAGAAGAAGAAAAACAAAAGAGGCTG
841 AAAGCTTTCCAGGGTTACCAGATCACAATGGAGACTTGTAAAGTGGCTGCTCCCGATTGG
901 ACATTTTTACACTGTTTACCCAGAAAGCCAGAAGAAGTTGATGATGAAGTATTTTATTCT
961 CCACAATCACTGGTTTTTCAAGAGGCTGAAAACAGGAAATGGACAATTACGGCTGTCATG
1021 GCTTCTCTGCTGACAGATTATTCACCACAGCTGCAAAAGCCTACATTTTGA
| Predicted Transcript Alignment |
Query is the experimental sequence.
Subject is the genomic sequence and gene model from the whole genome sequence assembly of Nightwing.
Query: 1 ATGCTGTTGAATTTTAGGTCTCTGTTCAATGCGGGACATGCCAACAGGATCCGCAAACAT
ATGCTGTTGAATTTTAGGTCTCTGTTCAATGCGGGACATGCCAACAGGATCCGCAAACAT
Subject: 1 ATGCTGTTGAATTTTAGGTCTCTGTTCAATGCGGGACATGCCAACAGGATCCGCAAACAT
Query: 61 CTGGTGCAATGTCTTTGTTCCAGGCATGGGCAACCTACAGAATCTCCCATTCAGCTGAAA
CTGGTGCAATGTCTTTGTTCCAGGCATGGGCAACCTACAGAATCTCCCATTCAGCTGAAA
Subject: 61 CTGGTGCAATGTCTTTGTTCCAGGCATGGGCAACCTACAGAATCTCCCATTCAGCTGAAA
Query: 121 GGCCATGACCTTCTAACGTTACAAAATTATAAAGCAGAGGAAATCGAATATTTGCTTTGG
GGCCATGACCTTCTAACGTTACAAAATTATAAAGCAGAGGAAATCGAATATTTGCTTTGG
Subject: 121 GGCCATGACCTTCTAACGTTACAAAATTATAAAGCAGAGGAAATCGAATATTTGCTTTGG
Query: 181 GCAGCATCGGATTTAAAAGAGAGAATCAAACACAAGAAGGAGCATTTGCCTTTGCTGCAA
GCAGCATCGGATTTAAAAGAGAGAATCAAACACAAGAAGGAGCATTTGCCTTTGCTGCAA
Subject: 181 GCAGCATCGGATTTAAAAGAGAGAATCAAACACAAGAAGGAGCATTTGCCTTTGCTGCAA
Query: 241 GGAAAATCCTTAGCAATGATTTTTGAAAAAAGAAGCACAAGGACTAGAATATCTACAGAG
GGAAAATCCTTAGCAATGATTTTTGAAAAAAGAAGCACAAGGACTAGAATATCTACAGAG
Subject: 241 GGAAAATCCTTAGCAATGATTTTTGAAAAAAGAAGCACAAGGACTAGAATATCTACAGAG
Query: 301 ACAGGATTTGCTCTCCTTGGAGGTCATCCCTGTTTCCTCACACTGCAAGACATTCACCTG
ACAGGATTTGCTCTCCTTGGAGGTCATCCCTGTTTCCTCACACTGCAAGACATTCACCTG
Subject: 301 ACAGGATTTGCTCTCCTTGGAGGTCATCCCTGTTTCCTCACACTGCAAGACATTCACCTG
Query: 361 GGCATTAATGAGAGCATCATGGACACAGCACTAGTATTGTCAACCATGACAGATGCAATC
GGCATTAATGAGAGCATCATGGACACAGCAC*AGTATTGTCAACCATGACAGATGCAATC
Subject: 361 GGCATTAATGAGAGCATCATGGACACAGCACGAGTATTGTCAACCATGACAGATGCAATC
Query: 421 CTAGCACGAGTCTATAAACAGGGTGATCTAGAGATGTTGGCACAAGAGGCCACAATCCCC
CTAGCACGAGTCTATAAACAGGGTGATCTAGAGATGTTGGCACAAGAGGCCACAATCCCC
Subject: 421 CTAGCACGAGTCTATAAACAGGGTGATCTAGAGATGTTGGCACAAGAGGCCACAATCCCC
Query: 481 GTGATAAATGGACTGTCAGATTTTGACCATCCTATCCAGATTTTGGCTGATTACCTTACA
GTGATAAATGGACTGTCAGATTTTGACCATCCTATCCAGATTTTGGCTGATTACCTTACA
Subject: 481 GTGATAAATGGACTGTCAGATTTTGACCATCCTATCCAGATTTTGGCTGATTACCTTACA
Query: 541 CTTCAGGAACACTACGGATCTTTGAAAGGTTTGACACTCAGCTGGATAGGTGATGGAAAT
CTTCAGGAACACTACGGATCTTTGAAAGGTTTGACACTCAGCTGGATAGGTGATGGAAAT
Subject: 541 CTTCAGGAACACTACGGATCTTTGAAAGGTTTGACACTCAGCTGGATAGGTGATGGAAAT
Query: 601 AATGTTCTGAATTCTATTATGCTGAGTGCTGCTAAATTTGGGATGGATCTGCACATTGCT
AATGTTCTGAATTCTATTATGCTGAGTGCTGCTAAATTTGGGATGGATCTGCACATTGCT
Subject: 601 AATGTTCTGAATTCTATTATGCTGAGTGCTGCTAAATTTGGGATGGATCTGCACATTGCT
Query: 661 ACTCCAAAAGGCTTTGAGCCAGATCCCATGGTGATTCAAATAGCAGAAGATTATTCCAGA
ACTCCAAAAGGCTTTGAGCCAGATCCCATGGTGATTCAAATAGCAGAAGATTATTCCAGA
Subject: 661 ACTCCAAAAGGCTTTGAGCCAGATCCCATGGTGATTCAAATAGCAGAAGATTATTCCAGA
Query: 721 AAGTACTGCACCAAACTGTTTCTCACCACTAATCCTCTTGAAGCTGCCAATGGAGCTAAT
AAGTACTGCACCAAACTGTTTCTCACCACTAATCCTCTTGAAGCTGCCAATGGAGCTAAT
Subject: 721 AAGTACTGCACCAAACTGTTTCTCACCACTAATCCTCTTGAAGCTGCCAATGGAGCTAAT
Query: 781 GTTTTGATCACAGACACATGGATAAGCATGGGGCAAGAAGAAGAAAAACAAAAGAGGCTG
GTTTTGATCACAGACACATGGATAAGCATGGGGCAAGAAGAAGAAAAACAAAAGAGGCTG
Subject: 781 GTTTTGATCACAGACACATGGATAAGCATGGGGCAAGAAGAAGAAAAACAAAAGAGGCTG
Query: 841 AAAGCTTTCCAGGGTTACCAGATCACAATGGAGACTTGTAAAGTGGCTGCTCCCGATTGG
AAAGCTTTCCAGGGTTACCAGATCACAATGGAGACTTGTAAAGTGGCTGCTCCCGATTGG
Subject: 841 AAAGCTTTCCAGGGTTACCAGATCACAATGGAGACTTGTAAAGTGGCTGCTCCCGATTGG
Query: 901 ACATTTTTACACTGTTTACCCAGAAAGCCAGAAGAAGTTGATGATGAAGTATTTTATTCT
ACATTTTTACACTGTTTACCCAGAAAGCCAGAAGAAGTTGATGATGAAGTATTTTATTCT
Subject: 901 ACATTTTTACACTGTTTACCCAGAAAGCCAGAAGAAGTTGATGATGAAGTATTTTATTCT
Query: 961 CCACAATCACTGGTTTTTCAAGAGGCTGAAAACAGGAAATGGACAATTACGGCTGTCATG
CCACAATCACTGGTTTTTCAAGAGGCTGAAAACAGGAAATGGACAATTACGGCTGTCATG
Subject: 961 CCACAATCACTGGTTTTTCAAGAGGCTGAAAACAGGAAATGGACAATTACGGCTGTCATG
Query: 1021 GCTTCTCTGCTGACAGATTATTCACCACAGCTGCAAAAGCCTACATTTTGA
GCTTCTCTGCTGACAGATTATTCACCACAGCTGCAAAAGCCTACATTTTGA
Subject: 1021 GCTTCTCTGCTGACAGATTATTCACCACAGCTGCAAAAGCCTACATTTTGA
| Predicted Protein Alignment |
Query is the experimental sequence.
Subject is the genomic sequence and gene model from the whole genome sequence assembly of Nightwing.
Query: 1 MLLNFRSLFNAGHANRIRKHLVQCLCSRHGQPTESPIQLKGHDLLTLQNYKAEEIEYLLW
MLLNFRSLFNAGHANRIRKHLVQCLCSRHGQPTESPIQLKGHDLLTLQNYKAEEIEYLLW
Subject: 1 MLLNFRSLFNAGHANRIRKHLVQCLCSRHGQPTESPIQLKGHDLLTLQNYKAEEIEYLLW
Query: 61 AASDLKERIKHKKEHLPLLQGKSLAMIFEKRSTRTRISTETGFALLGGHPCFLTLQDIHL
AASDLKERIKHKKEHLPLLQGKSLAMIFEKRSTRTRISTETGFALLGGHPCFLTLQDIHL
Subject: 61 AASDLKERIKHKKEHLPLLQGKSLAMIFEKRSTRTRISTETGFALLGGHPCFLTLQDIHL
Query: 121 GINESIMDTALVLSTMTDAILARVYKQGDLEMLAQEATIPVINGLSDFDHPIQILADYLT
GINESIMDTA*VLSTMTDAILARVYKQGDLEMLAQEATIPVINGLSDFDHPIQILADYLT
Subject: 121 GINESIMDTARVLSTMTDAILARVYKQGDLEMLAQEATIPVINGLSDFDHPIQILADYLT
Query: 181 LQEHYGSLKGLTLSWIGDGNNVLNSIMLSAAKFGMDLHIATPKGFEPDPMVIQIAEDYSR
LQEHYGSLKGLTLSWIGDGNNVLNSIMLSAAKFGMDLHIATPKGFEPDPMVIQIAEDYSR
Subject: 181 LQEHYGSLKGLTLSWIGDGNNVLNSIMLSAAKFGMDLHIATPKGFEPDPMVIQIAEDYSR
Query: 241 KYCTKLFLTTNPLEAANGANVLITDTWISMGQEEEKQKRLKAFQGYQITMETCKVAAPDW
KYCTKLFLTTNPLEAANGANVLITDTWISMGQEEEKQKRLKAFQGYQITMETCKVAAPDW
Subject: 241 KYCTKLFLTTNPLEAANGANVLITDTWISMGQEEEKQKRLKAFQGYQITMETCKVAAPDW
Query: 301 TFLHCLPRKPEEVDDEVFYSPQSLVFQEAENRKWTITAVMASLLTDYSPQLQKPTF-
TFLHCLPRKPEEVDDEVFYSPQSLVFQEAENRKWTITAVMASLLTDYSPQLQKPTF-
Subject: 301 TFLHCLPRKPEEVDDEVFYSPQSLVFQEAENRKWTITAVMASLLTDYSPQLQKPTF-
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